Standardizing Immunohistochemistry: A New Reference Control for Detecting Staining Problems

A new standardized immunohistochemistry (IHC) control for breast cancer testing comprises formalin-fixed human epidermal growth factor receptor 2, estrogen receptor, or progesterone receptor peptide antigens covalently attached to 8-µm glass beads. The antigen-coated beads are suspended in a liquid matrix that hardens upon pipetting onto a glass microscope slide. The antigen-coated beads remain in place through deparaffinization, antigen retrieval, and immunostaining. The intensity of the beads’ stain provides feedback regarding the efficacy of both antigen retrieval and immunostaining. As a first report, we tested the sensitivity and specificity of the new IHC controls (“IHControls”). To evaluate sensitivity, various staining problems were simulated. IHControls detected primary and secondary reagent degradation similarly to tissue controls. This first group of IHControls behaved similarly to tissue controls expressing high concentrations of the antigen. The IHControls were also able to detect aberrations in antigen retrieval, as simulated by sub-optimal times or temperatures. Specificity testing revealed that each antigen-coated bead was specific for its cognate IHC test antibody. The data support the conclusion that, like tissue controls, IHControls are capable of verifying the analytic components of an immunohistochemical stain. Unlike tissue controls, IHControls are prepared in large bulk lots, fostering day-to-day reproducibility that can be standardized across laboratories.     

厦门地区夏季播种的松花型花椰菜营养品质评价

以厦门地区夏季播种的抗热松花型台湾花椰菜Brassica oleracea var. botrytis品种为材料，比较各品种生物学性状、营养成分、矿质元素、能源、植物功能性指标，并以低能高营养的消费原则，采用平均隶属函数值对品种进行评价。结果表明，平均隶属函数值依次为‘雪松’(4.805) >‘香雪’(3.282) >‘雪丽’(2.279) >‘庆农S90’(1.037)。结合生育期考虑，‘雪松’为夏季较适合在厦门地区推广的松花型花椰菜抗热新品种。     

Regional ecological risk assessment using a relative risk model: A case study of the Darwin Harbour,Darwin, Australia

There are many proposed and ongoing commercial, industrial, and residential developments within the Darwin Harbour catchment in Northern Australia, to accommodate the projected population growth over the next 20 years. Hence, it is necessary to ensure the balance between these developments and ecosystem conservation. We evaluated ecological risk for the Darwin Harbour using a relative risk model (RRM). The catchment was divided into 22 risk regions based on small catchment boundaries and their homogeneity. Through the RRM, we ranked and summed the stressors and habitats within regions. The interaction between stressors and habitats were modeled through exposure and effect filters. The ecological assessment endpoints were maintenance of the mangrove health and the maintenance of water quality. The risk regions—Myrmidon Creek, Blackmore River, Bleesers Creek, and Elizabeth River—showed the highest total relative risk for ecological assets. These risk regions had a high percentage cover of industrial, commercial, and residential areas; diffuse entry points; and climate change effects. Creek A, Sandy Creek, West Arm, and Pioneer Creek were the risk regions with lowest total relative risk scores. The RRM is a robust application that is suitable for a large geographic area where multiple stressors are of concern.     

尼泊尔生态系统质量评估与时空格局变化——基于参照条件的评估方法

良好的生态系统质量是维持人类社会供给需求和可持续发展目标实现的重要保障。针对尼泊尔自然地理环境复杂多样，区域间气候差异明显的特点，结合基于参照条件的评估方法可以得到生态系统质量的相对水平值，其结果能够反映出不同的变化信息。植被是区域生态系统质量变化的重要指示器，利用尼泊尔五大地理区以及四种主要植被生态系统类型划分出20个生态评估区，从表征植被生态系统的水平结构、生产功能和垂直结构3个方面计算生态参数相对密度指标（RVI），结合主成分分析法构建植被生态系统质量指数（VEQI），并以其国家自然保护区为参照，构建基于参照条件的生态系统质量评估模型，计算了尼泊尔2016和2020年基于参照条件的植被生态系统质量指数（VEQI''）并分析其生态系统质量的时空格局变化。结果表明：（1）2016至2020年，尼泊尔生态系统质量现实值VEQI的平均值增加了3.49%，总体上，在参照生态系统质量（VEQI_ref）提高（约1.41%）的背景下，生态系统质量相对水平值VEQI''增加了1.42%；（2）对于尼泊尔地区，评估区89%分位数的VEQI与其对应的国家自然保护区的参照值具有很强的相关性，总体差异较小，可以代替作为参照值；（3）从空间格局变化趋势来看，尼泊尔生态系统质量变好、基本稳定和变差的面积分别占植被生态系统总面积的74.16%、14.25%和11.59%。与数量不足、较难收集利用的野外观测台站数据相比，国家自然保护区更接近理想参照生态系统的假设，通过有限的自然保护区确定生态评估区的参照值，实现生态系统质量的快速评估，其结果具有更好的时空可比性，可以为区域生态质量变化评估及量化分析等方面提供参考。     

Latitudinal variation in blue tit and great tit nest characteristics indicates environmental adjustment

Aim The laying of eggs and the building of a nest structure to accommodate them are two of the defining characteristics of members of the class Aves. Nest structures vary considerably across avian taxa and for many species the structure of the completed nest can have important consequences both for parents and their offspring. While nest characteristics are expected to vary adaptively in response to environmental conditions, large‐scale spatial variation in nest characteristics has been largely overlooked. Here, we examine the effects of latitudinal variation in spring temperatures on nest characteristics, including insulatory properties, and reproductive success of blue tits, Cyanistes caeruleus, and great tits, Parus major. Location Great Britain. Methods Nests and reproductive data were collected from seven study sites, spread over 5° of latitude. The nest insulatory properties were then determined before the nests were separated into nest base material and cup lining material. Results As spring temperatures increased with decreasing latitude, the mass of the nest base material did not vary in either species, while the mass of the cup lining material and nest insulatory properties decreased in both species. This suggests that in response to increasing temperatures the breeding female reduces the mass of the cup lining material, thereby maintaining an appropriate microclimate for incubating and brooding. The mean first egg date of both species advanced with decreasing latitude and increasing spring temperatures, although clutch size and brood size at hatching and fledging did not vary. Main conclusions This is the first study to demonstrate that the nest‐construction behaviour of birds varies in response to large‐scale spatial variation in ambient temperatures. Therefore, nest composition reliably indicates environmental conditions and we suggest that studies of nest structure may be sentinels for the early signs of rapid climate change.     

Elastase-mediated Activation of the Severe Acute Respiratory Syndrome Coronavirus Spike Protein at Discrete Sites within the S2 Domain

Proteolytic priming is a common method of controlling the activation of membrane fusion mediated by viral glycoproteins. The severe acute respiratory syndrome coronavirus spike protein (SARS-CoV S) can be primed by a variety of host cell proteases, with proteolytic cleavage occurring both as the S1/S2 boundary and adjacent to a fusion peptide in the S2 domain. Here, we studied the priming of SARS-CoV S by elastase and show an important role for residue Thr⁷⁹⁵ in the S2 domain. A series of alanine mutants were generated in the vicinity of the S2 cleavage site, with the goal of examining elastase-mediated cleavage within S2. Both proteolytic cleavage and fusion activation were modulated by altering the cleavage site position. We propose a novel mechanism whereby SARS-CoV fusion protein function can be controlled by spatial regulation of the proteolytic priming site, with important implications for viral pathogenesis.     

Responses of heather moorland and Mediterranean mouflon foraging to prescribed-burning and cutting

We assessed the effects of prescribed burning and cutting on mouflon (Ovis gmelini musimon × Ovis sp.) spring habitat using an experimental design (17.28 ha) of 2 burned, 2 cut, and 2 untreated plots within a homogeneous stand dominated by heather (Erica cinerea and Calluna vulgaris). Overall, we found a shift in treated plots from ligneous species to herbaceous species with high digestive and energetic values for mouflon. We also found a consistently higher number of mouflon feeding on these treated habitats compared to untreated plots. Such effects were still apparent 4 years after habitat modifications. Our approaches could be used by managers to improve and maintain the range of mouflon populations experiencing habitat loss (e.g., woody plant encroachment) and for which the condition of an animal has often a high economical value through trophy hunting. © 2011 The Wildlife Society.     

Influence of derived operation-specific tractor emission data on results from an LCI on wheat production

The shortage of data for emissions from agricultural tractors contributes to LCA results on environmental load from modern crop production possibly having high error levels and high uncertainties. The first part of this work describes measurements and calculations made in order to obtain operation-specific agricultural emission data. Calculations are based on emission data measured on a standard 70 kW tractor of a widely available make. In the second part, results from an LCI on wheat production based on traditionally used emission data are calculated and compared with results obtained when using the emission data for specific working operations derived in part one. One conclusion of the study is that the emission values, when related to the energy in the used fuel, show very large variations between different driving operations. Another conclusion is that the use of the new data results in a marked reduction of the total air emissions produced in the wheat production chain, especially for CO and HC, but also for NO_x and SO₂.